Библиография
Часть 1
Bokelmann, L. et al., 2019, «A genetic analysis of the Gibraltar Neanderthals», Proceedings of the National Academy of Sciences, 116(31), p. 15610–15615.
Chen, F. et al., 2019, «A late Middle Pleistocene Denisovan mandible from the Tibetan Plateau», Nature, 569(7756), p. 409–412.
DeCasien, A. R. et al., 2017, «Primate brain size is predicted by diet but not sociality», Nature Ecology and Evolution, 1(5), p. 1–7.
Détroit, F. et al., 2019, «A new species of Homo from the Late Pleistocene of the Philippines», Nature, 568(7751), p. 181–186.
Dunbar, R., 1998, «The social brain hypothesis», Evolutionary Anthropology, p. 178–190.
Green, R. E. et al., 2010, «A draft sequence of the Neandertal genome», Science, 328(5979), p. 710–722.
Hershkovitz, I. et al., 2018, «The earliest modern humans outside Africa», Science, 359(6374), p. 456–459.
Heyer, E. (éd.), 2015, Une belle histoire de l’Homme, Flammarion.
Hublin, J.-J. et al., 2015, «Brain ontogeny and life history in Pleistocene hominins», Philosophical Transactions of the Royal Society B: Biological Sciences, 370(1663).
Hublin, J. J., 2009, «Out of Africa: modern human origins special feature: the origin of Neandertals», Proceedings of the National Academy of Sciences, 106(38), p. 16022–16027.
Hublin, J.-J., 2017, «The last Neanderthal», Proceedings of the National Academy of Sciences, 114(40), p. 10520–10522.
Hublin, J.-J. et al., 2017, «New fossils from Jebel Irhoud, Morocco and the pan-African origin of Homo sapiens», Nature, 546(7657), p. 289–292.
Jónsson, H. et al., 2017, «Parental influence on human germline de novo mutations in 1,548 trios from Iceland», Nature, 549(7673), p. 519–522.
Kaplan, H. et al., 2000, «A theory of human life history evolution: Diet, intelligence, and longevity», Evolutionary Anthropology, 9(4), p. 156–185.
Llamas, B. et al., 2017, «Human evolution: A tale from ancient genomes», Philosophical Transactions of the Royal Society B: Biological Sciences, 372(1713).
Meyer, M. et al., 2016, «Nuclear DNA sequences from the Middle Pleistocene Sima de los Huesos hominins», Nature, 531(7595), p. 504–507.
Mikkelsen, T. S. et al., 2005, «Initial sequence of the chimpanzee genome and comparison with the human genome», Nature, 437(7055), p. 69–87.
Pavard, S. et Coste, C., 2019, «Evolution of the human lifecycle», in Encyclopedia of Biomedical Gerontology, Academic Press.
Prado-Martinez, J. et al., 2013, «Great ape genetic diversity and population history», Nature, 499(7459), p. 471–475.
Prat, S., 2018, «First hominin settlements out of Africa. Tempo and dispersal mode: Review and perspectives», Comptes Rendus — Palevol, 17(1–2), p. 6–16.
Prüfer, K. et al., 2012, «The bonobo genome compared with the chimpanzee and human genomes», Nature, 486, p. 527–531.
Reich, D. et al., 2010, «Genetic history of an archaic hominin group from Denisova Cave in Siberia», Nature, 468(7327), p. 1053–1060.
Sánchez-Quinto, F. et Lalueza-Fox, C., 2015, «Almost 20 years of Neanderthal palaeogenetics: Adaptation, admixture, diversity, demography and extinction», Philosophical Transactions of the Royal Society B: Biological Sciences, 370(1660).
Scally, A. et Durbin, R., 2012, «Revising the human mutation rate: implications for understanding human evolution», Nature Reviews Genetics, 13(10), p. 745–753.
Scerri, E. M. L. et al., 2018, «Did our species evolve in subdivided populations across Africa, and why does it matter?», Trends in Ecology & Evolution, 33(8), p. 582–594.
Schlebusch, C. M. et al., 2017, «Southern African ancient genomes estimate modern human divergence to 350,000 to 260,000 years ago», Science, 358(6363), p. 652–655.
Ségurel, L. et al., 2014, «Determinants of mutation rate variation in the human germline», Annual Review of Genomics and Human Genetics, 15(1), p. 47–70.
Slatkin, M. et Racimo, F., 2016, «Ancient DNA and human history», Proceedings of the National Academy of Sciences, 113(23), p. 6380–6387.
Slon, V. et al., 2018, «The genome of the offspring of a Neanderthal mother and a Denisovan father», Nature, 561(7721), p. 113–116.
Verendeev, A. et Sherwood, C. C., 2017, «Human brain evolution», Current Opinion in Behavioral Sciences, 16, p. 41–45.
Wolf, A. B. et Akey, J. M., 2018, «Outstanding questions in the study of archaic hominin admixture», PLoS Genetics, 14(5), p. 1–14.
Часть 2
Atkinson, E. G. et al., 2018, «No evidence for recent selection at FOXP2 among diverse human populations», Cell, 174(6), p. 1424–1435.
Beleza, S. et al., 2013, «The timing of pigmentation lightening in Europeans», Molecular Biology and Evolution, 30(1), p. 24–35.
Bird, M. I. et al., 2019, «Early human settlement of Sahul was not an accident», Scientific Reports, 9(1), p. 1–10.
Canfield, V. A. et al., 2013, «Molecular phylogeography of a human autosomal skin color locus under natural selection», G3 (Bethesda), 3(11), p. 2059–2067.
Cerqueira, C. C. S. et al., 2012, «Predicting homo pigmentation phenotype through genomic data: From neanderthal to James Watson», American Journal of Human Biology, 24(5), p. 705–709.
Chaix, R. et al., 2008, «Genetic traces of east-to-west human expansion waves in Eurasia», American Journal of Physical Anthropology, 136(3).
Colonna, V. et al., 2011, «A world in a grain of sand: Human history from genetic data», Genome Biology, 12(11).
Crawford, N. G. et al., 2017, «Loci associated with skin pigmentation identified in African populations», Science, 358(6365).
Dannemann, M. et Kelso, J., 2017, «The contribution of Neanderthals to phenotypic variation in modern humans», American Journal of Human Genetics, 101(4), p. 578–589.
Deng, L. et Xu, S., 2018, «Adaptation of human skin color in various populations», Hereditas, 155(1).
Donnelly, M. P. et al., 2012, «A global view of the OCA2-HERC2 region and pigmentation», Human Genetics, 131(5), p. 683–696.
Fan, S. et al., 2016, «Review of recent human adaptation», Science, 354(6308), p. 54–59.
Fu, Q. et al., 2014, «Genome sequence of a 45,000-year-old modern human from western Siberia», Nature, 514(7253), p. 445–449.
Fu, Q. et al., 2016, «The genetic history of Ice Age Europe», Nature, 534(7606), p. 200–205.
Fumagalli, M. et al., 2015, «Greenlandic Inuit show genetic signatures of diet and climate adaptation», 349(6254), p. 1343–1347.
Günther, T. et Jakobsson, M., 2016, «Genes mirror migrations and cultures in prehistoric Europe — a population genomic perspective», Current Opinion in Genetics and Development, 41, p. 115–123.
Günther, T. et al., 2018, «Population genomics of Mesolithic Scandinavia: Investigating early postglacial migration routes and high-latitude adaptation», PLoS Biology, 16(1), p. 1–22.
Hay, S. I. et al., 2004, «The global distribution and population at risk of malaria: past, present, and future», The Lancet. Infectious Diseases, 4(6), p. 327–336.
Hellenthal, G. et al., 2014, «A genetic atlas of human admixture history», Science, 343(6172), p. 747–751.
Hlusko, L. J. et al., 2018, «Environmental selection during the last ice age on the mother-to-infant transmission of vitamin D and fatty acids through breast milk», Proceedings of the National Academy of Sciences, 115(19).
Hublin, J. J., 2015, «The modern human colonization of western Eurasia: When and where?», Quaternary Science Reviews, 118, p. 194–210.
Huerta-Sánchez, E. et al., 2014, «Altitude adaptation in Tibetans caused by introgression of Denisovan-like DNA», Nature, 512(7513), p. 194–197.
Ilardo, M. A. et al., 2018, «Physiological and Genetic Adaptations to Diving in Sea Nomads», Cell, 173(3), p. 569–580.
Ingicco, T. et al., 2018, «Earliest known hominin activity in the Philippines by 709 thousand years ago», Nature, 557(7704), p. 233–237.
Jablonski, N. G., 2004, «The evolution of human skin and skin color», Annual Review of Anthropology, 33(1), p. 585–623.
Jablonski, N. G. et Chaplin, G., 2017, «The colours of humanity: The evolution of pigmentation in the human lineage», Philosophical Transactions of the Royal Society B: Biological Sciences, 372(1724).
Jones, E. R. et al., 2015, «Upper Palaeolithic genomes reveal deep roots of modern Eurasians», Nature Communications, 6, p. 1–8.
Kamberov, Y. G. et al., 2013, «Modeling recent human evolution in mice by expression of a selected EDAR variant», Cell, 152(4), p. 691–702.
Karlsson, E. K. et al., 2014, «Natural selection and infectious disease in human populations», Nature Publishing Group, 15(6), p. 379–393.
Kubo, D. et al., 2013, «Brain size of Homo floresiensis and its evolutionary implications», Proceedings of the Royal Society B: Biological Sciences, 280(1760).
Lachance, J. et al., 2012, «Evolutionary history and adaptation from high-coverage whole-genome sequences of diverse African hunter-gatherers», Cell, 150(3), p. 457–469.
Lalueza-Fox, C. et al., 2007, «A melanocortin 1 receptor allele suggests varying pigmentation among Neanderthals», Science, 318(5855), p. 1453–1455.
Lazaridis, I., 2018, «The evolutionary history of human populations in Europe», Current Opinion in Genetics and Development, 53, p. 21–27.
Lazaridis, I. et al., 2014, «Ancient human genomes suggest three ancestral populations for present-day Europeans», Nature, 513(7518), p. 409–413.
Llamas, B. et al., 2017, «Human evolution: A tale from ancient genomes», Philosophical Transactions of the Royal Society B: Biological Sciences, 372(1713).
Lopez, M. et al., 2019, «Genomic evidence for local adaptation of hunter-gatherers to the African rainforest», Current Biology, 29(17), p. 2926–2935.
Malaspinas, A. S. et al., 2016, «A genomic history of Aboriginal Australia», Nature, 538(7624), p. 207–214.
Marciniak, S. et Perry, G. H., 2017, «Harnessing ancient genomes to study the history of human adaptation», Nature Reviews Genetics, 18(11), p. 659–674.
Martin, A. R. et al., 2017, «An unexpectedly complex architecture for skin pigmentation in Africans», Cell, 171(6), p. 1340–1353.
Martinez-Cruz, B. et al., 2011, «In the heartland of Eurasia: the multilocus genetic landscape of Central Asian populations», European Journal of Human Genetics, 19(2), p. 216.
Mathieson, I. et al., 2015, «Genome-wide patterns of selection in 230 ancient Eurasians», Nature, 528(7583).
McColl, H. et al., 2018, «The prehistoric peopling of Southeast Asia», Science, 361(6397).
Moore, L. G. et al., 2001, «Tibetan protection from intrauterine growth restriction (IUGR) and reproductive loss at high altitude», American Journal of Human Biology, 13(5), p. 635–644.
Nakagome, S. et al., 2015, «Estimating the ages of selection signals from different epochs in human history», Molecular Biology and Evolution, 33(3), p. 657–669.
Nielsen, R. et al., 2017, «Tracing the peopling of the world through genomics», Nature, 541(7637), p. 302–310.
Norton, H. L. et al., 2007, «Genetic evidence for the convergent evolution of light skin in Europeans and East Asians», Molecular Biology and Evolution, 24(3), p. 710–722.
O’Connell, J. F. et al., 2018, «When did Homo sapiens first reach Southeast Asia and Sahul?», Proceedings of the National Academy of Sciences, 115(34), p. 8482–8490.
Olalde, I. et al., 2014, «Derived immune and ancestral pigmentation alleles in a 7,000-year-old Mesolithic European», Nature, 507(7491), p. 225–228.
Pagani, L. et al., 2016, «Genomic analyses inform on migration events during the peopling of Eurasia», Nature, 538(7624), p. 238–242.
Palstra, F. P. et al., 2015, «Statistical inference on genetic data reveals the complex demographic history of human populations in Central Asia», Molecular Biology and Evolution, 32(6), p. 1411–1424.
Patin, E. et al., 2009, «Inferring the demographic history of African farmers and Pygmy hunter-gatherers using a multilocus resequencing data set», PLoS Genetics, 5(4).
Patin, E. et al., 2017, «Dispersals and genetic adaptation of Bantu-speaking populations in Africa and North America», Science, 356(6337), p. 543–546.
Pemberton, T. J. et al., 2018, «A genome scan for genes underlying adult body size differences between Central African hunter-gatherers and farmers», Human Genetics, 137(6–7), p. 487–509.
Piel, F. B. et al., 2010, «Global distribution of the sickle cell gene and geographical confirmation of the malaria hypothesis», Nature Communications, 1(8).
Posth, C. et al., 2016, «Pleistocene mitochondrial genomes suggest a single major dispersal of non-Africans and a late glacial population turnover in Europe», Current Biology, 26(4), p. 557–561.
Quach, H. et al., 2016, «Genetic adaptation and Neandertal admixture shaped the immune system of human populations», Cell, 167(3), p. 643–656.
Quillen, E. E. et al., 2019, «Shades of complexity: New perspectives on the evolution and genetic architecture of human skin», American Journal of Physical Anthropology, 168, p. 4–26.
Raghavan, M. et al., 2015, «POPULATION GENETICS. Genomic evidence for the Pleistocene and recent population history of Native Americans», Science, 349(6250).
Rasmussen, M. et al., 2011, «An aboriginal Australian genome reveals separate human dispersals into Asia», Science, 334(6052), p. 94–98.
Rogers, A. R. et al., 2004, «Genetic variation at the MC1R Locus and the time since loss of human body hair», Current Anthropology, 45(1), p. 105–108.
Roullier, C. et al., 2013, «Historical collections reveal patterns of diffusion of sweet potato in Oceania obscured by modern plant movements and recombination», Proceedings of the National Academy of Sciences, 110(6), p. 2205–2210.
Schlebusch, C. M. et al., 2012, «Genomic variation in seven Khoe-San groups reveals adaptation and complex African history», Science, 374(2012), p. 1–10.
Schlebusch, C. M. et al., 2015, «Human adaptation to arsenic-rich environments», Molecular Biology and Evolution, 32(6), p. 1544–1555.
Schlebusch, C. M. et al., 2018, «Tales of human migration, admixture, and selection in Africa», Annual Review of Genomics and Human Genetics, 19(1), p. 405–428.
Schlebusch, C. M. et al., 2017, «Southern African ancient genomes estimate modern human divergence to 350,000 to 260,000 years ago», Science, 358(6363), p. 652–655.
Sikora, M. et al., 2017, «Ancient genomes show social and reproductive behavior of early Upper Paleolithic foragers», 358(6363), p. 659–662.
Skoglund, P. et Mathieson, I., 2018, «Ancient human genomics: The first decade», Annual Review of Genomics and Human Genetics, 19(1), p. 381–404.
Skoglund, P. et al., 2017, «Reconstructing prehistoric African population structure», Cell, 171(1), p. 59–71.
Slatkin, M. et Racimo, F., 2016, «Ancient DNA and human history», Proceedings of the National Academy of Sciences, 113(23), p. 6380–6387.
Smith, J. et al., 2018, «Estimating time to the common ancestor for a beneficial allele», Molecular Biology and Evolution, 35(4), p. 1003–1017.
Tucci, S. et al., 2018, «Evolutionary history and adaptation of a human pygmy population of Flores Island, Indonesia», Science, 361(6401), p. 511–516.
Veeramah, K. R. et Hammer, M. F., 2014, «The impact of whole-genome sequencing on the reconstruction of human population history», Nature Reviews Genetics, 15(3), p. 149–162.
Verdu, P., 2016, «African Pygmies», Current Biology, 26(1), p. R12–R14.
Verdu, P. et al., 2009, «Origins and genetic diversity of pygmy hunter-gatherers from Western Central Africa», Current Biology, 19(4), p. 312–318.
Verdu, P. et al., 2010, «Limited dispersal in mobile huntergatherer Baka Pygmies», Biology Letters, 6(6), p. 858–861.
Walsh, S. et al., 2017, «Global skin colour prediction from DNA», Human Genetics, 136(7), p. 847–863.
Wilde, S. et al., 2014, «Direct evidence for positive selection of skin, hair, and eye pigmentation in Europeans during the last 5,000 y», Proceedings of the National Academy of Sciences, 111(13), p. 4832–4837.
Wong, E. H. M. et al., 2017, «Reconstructing genetic history of Siberian and Northeastern European populations», Genome Research, 27(1), p. 1–14.
Yang, M. A. et Fu, Q., 2018, «Insights into modern human prehistory using ancient genomes», Trends in Genetics, 34(3), p. 184–196.
Yang, M. A. et al., 2017, «40,000-year-old individual from Asia provides insight into early population structure in Eurasia», Current Biology, 27(20), p. 3202–3208.
Yang, Z. et al., 2016, «A genetic mechanism for convergent skin lightening during recent human evolution», Molecular Biology and Evolution, 33(5), p. 1177–1187.
Часть 3
Aimé, C. et al., 2013, «Human genetic data reveal contrasting demographic patterns between sedentary and nomadic populations that predate the emergence of farming», Molecular Biology and Evolution, 30(12), p. 2629–2644.
Aimé, C. et al., 2014, «Microsatellite data show recent demographic expansions in sedentary but not in nomadic human populations in Africa and Eurasia», European Journal of Human Genetics, 22(10), p. 1201.
Allentoft, M. E. et al., 2015, «Population genomics of Bronze Age Eurasia», Nature, 522(7555), p. 167–172.
Bahuchet, S., 1991, «Spatial mobility and access to resources among the African Pygmies», in M. J. Casimir, A. Rao, Mobility and Territoriality: Social and Spatial Boundaries among Foragers, Fishers, Pastoralists and Peripatetics, Berg, p. 205–255.
Batini, C. et al., 2015, «Large-scale recent expansion of European patrilineages shown by population resequencing», Nature Communications, 6.
Becker, N. S. A. et al., 2012, «Short stature in African Pygmies is not explained by sexual selection», Evolution and Human Behavior, 33(6), p. 615–622.
Becker, N. S. A. et al., 2011, «Indirect evidence for the genetic determination of short stature in African Pygmies», American Journal of Physical Anthropology, 145(3), p. 390–401.
Becker, N. S. A. et al., 2013, «The role of GHR and IGF1 genes in the genetic determination of African Pygmies’ short stature», European Journal of Human Genetics, 21(6), p. 653.
Brites, D., 2015, «Co-evolution of Mycobacterium tuberculosis and Homo sapiens», Immunological reviews, 264(1), p. 6–24.
Broushaki, F. et al., 2016, «Early Neolithic genomes from the eastern Fertile Crescent», Science, 7943, p. 1–16.
Chiang, C. W. K. et al., 2018, «Genomic history of the Sardinian population», Nature Genetics, 50(10).
De Barros Damgaard, P. et al., 2018, «137 ancient human genomes from across the Eurasian steppes», Nature, 557(7705).
De Barros Damgaard, P. et al., 2018, «The first horse herders and the impact of early Bronze Age steppe expansions into Asia», Science, 360(6396).
Ermini, L. et al., 2008, «Report complete mitochondrial genome sequence of the Tyrolean iceman», Current Biology, 18(21), p. 1687–1693.
Evershed, R. P. et al., 2008, «Earliest date for milk use in the Near East and southeastern Europe linked to cattle herding», Nature, 455, p. 31–34.
Fan, S. et al., 2016, «Going global by adapting local: Review of recent human adaptation», Science, 354(6308), p. 54–59.
Feldman, M. et al., 2019, «Late Pleistocene human genome suggests a local origin for the first farmers of central Anatolia», Nature Communications, 10(1).
Furholt, M., 2018, «Massive migrations? The impact of recent aDNA studies on our view of third millennium Europe», European Journal of Archaeology, 21(2), p. 159–191.
Gallego-Llorente, M. et al., 2016, «The genetics of an early Neolithic pastoralist from the Zagros, Iran», Scientific Reports, 6(31326), p. 4–10.
Gaunitz, C. et al., 2018, «Ancient genomes revisit the ancestry of domestic and Przewalski’s horses», Science, 360(6384), p. 111–114.
Goldberg, A. et al., 2017, «Ancient X chromosomes reveal contrasting sex bias in Neolithic and Bronze Age Eurasian migrations», Proceedings of the National Academy of Sciences, 114(10), p. 2657–2662.
González-Fortes, G. et al., 2017, «Paleogenomic evidence for multi-generational mixing between Neolithic farmers and Mesolithic hunter-gatherers in the lower Danube basin», Current Biology, 27(12), p. 1801–1810.
Gross, B. L. et Olsen, K. M., 2010, «Genetic perspectives on crop domestication», Trends in Plant Science, 15(9), p. 529–537.
Günther, T. et Jakobsson, M., 2016, «Genes mirror migrations and cultures in prehistoric Europe — a population genomic perspective», Current Opinion in Genetics and Development, 41, p. 115–123.
Günther, T. et al., 2015, «Ancient genomes link early farmers from Atapuerca in Spain to modern-day Basques», Proceedings of the National Academy of Sciences, 112(38).
Haak, W. et al., 2015, «Massive migration from the steppe was a source for Indo-European languages in Europe», Nature, 522(7555), p. 207–211.
Harper, K. N. et Armelagos, G. J., 2013, «Genomics, the origins of agriculture, and our changing microbe-scape: Time to revisit some old tales and tell some new ones», American Journal of Physical Anthropology, 152, p. 135–152.
Hershkovitz, I. et al., 2008, «Detection and molecular characterization of 9000-year-old mycobacterium tuberculosis from a Neolithic settlement in the Eastern Mediterranean», PLoS One, 3(10), p. 1–6.
Heyer, E. et al., 2011, «Lactase persistence in central Asia: phenotype, genotype, and evolution», Human Biology, 83(3), p. 379–392.
Jeong, C. et al., 2018, «Bronze Age population dynamics and the rise of dairy pastoralism on the eastern Eurasian steppe», Proceedings of the National Academy of Sciences, 115(48).
Karmin, M. et al., 2015, «A recent bottleneck of Y chromosome diversity coincides with a global change in culture», Genome Research, 25(4), p. 459–466.
Keller, A. et al., 2012, «New insights into the Tyrolean Iceman’s origin and phenotype as inferred by wholegenome sequencing», Nature Communications, 28.
Kılınç, G. M. et al., 2016, «The demographic development of the first farmers in Anatolia», Current Biology, 26(19), p. 2659–2666.
Kluyver, T. A. et al., 2017, «Unconscious selection drove seed enlargement in vegetable crops», Evolution Letters, 1(2), p. 64–72.
Krzewińska, M. et al., 2018, «Ancient genomes suggest the eastern Pontic-Caspian steppe as the source of western Iron Age nomads», Science Advances, 4(10).
Laval, G. et al., 2019, «Recent adaptive acquisition by African rainforest hunter-gatherers of the late Pleistocene sickle-cell mutation suggests past differences in Malaria exposure», American Journal of Human Genetics, 104(3), p. 553–561.
Lazaridis, I. et al., 2016, «Genomic insights into the origin of farming in the ancient Near East», Nature, 536(7617), p. 419–424.
Lin, T. et al., 2014, «Genomic analyses provide insights into the history of tomato breeding», Nature Publishing Group, 46(11), p. 1220–1226.
Lipson, M. et al., 2017, «Parallel palaeogenomic transects reveal complex genetic history of early European farmers», Nature, 551(7680), p. 368–372.
Lopez, M. et al., 2018, «The demographic history and mutational load of African hunter-gatherers and farmers», Nature Ecology and Evolution, 2(4), p. 721–730.
Mathieson, I. et al., 2018, «The genomic history of southeastern Europe», Nature, 555(7695), p. 197–203.
Mathieson, S. et Mathieson, I., 2018, «FADS1 and the timing of human adaptation to agriculture», Molecular Biology and Evolution, 35(12), p. 2957–2970.
Mélanie, S. et al., 2012, «Earliest evidence for cheese making in the sixth millennium», Nature, 493, p. 522–525.
Meller, H. et al., 2014, «2200 BC — Ein Klimasturz als Ursache für den Zerfall der Alten Welt? 2200 BC — A climatic breakdown as a cause for the collapse of the old world?», 7th Archaeological Conference of Central Germany, October 23–26, 2014 in Halle (Saale).
Narasimhan, A. V. M. et al., 2018, «The genomic formation of south and central Asia», Science, 365(6457).
Novembre, J. et al., 2009, «Genes mirror geography within Europe», Nature, 456(7218), p. 98–101.
Okazaki, K. et al., 2019, «A paleopathological approach to early human adaptation for wet-rice agriculture: The first case of Neolithic spinal tuberculosis at the Yangtze River Delta of China», International Journal of Paleopathology, 24, p. 236–244.
Olalde, I. et al., 2018, «The Beaker phenomenon and the genomic transformation of northwest Europe», Nature, 555(7695), p. 190–196.
Olalde, I. et al., 2019, «The genomic history of the Iberian Peninsula over the past 8000 years», Science, 363(6432).
Outram, A. K. et al., 2009, «The earliest horse harnessing and milking», Science, 323(5919), p. 1332–1335.
Patin, E. et al., 2014, «The impact of agricultural emergence on the genetic history of African rainforest hunter-gatherers and agriculturalists», Nature Communications, 5.
Patin, E. et al., 2017, «Dispersals and genetic adaptation of Bantu-speaking populations in Africa and North America», Science, 356(6337), p. 543–546.
Pearce-Duvet, J. M. C., 2006, «The origin of human pathogens: evaluating the role of agriculture and domestic animals in the evolution of human disease», Biological Reviews of the Cambridge Philosophical Society, 81(3), p. 369–382.
Pemberton, T. J. et al., 2018, «A genome scan for genes underlying adult body size differences between Central African hunter-gatherers and farmers», Human Genetics, 137(6–7), p. 487–509.
Ramirez-Rozzi, F. V., 2018, «Reproduction in the Baka pygmies and drop in their fertility with the arrival of alcohol», Proceedings of the National Academy of Sciences, 115(27).
Rozzi, F. V. et al., 2015, «Growth pattern from birth to adulthood in African pygmies of known age», Nature Communications, 6.
Saag, L. et al., 2017, «Extensive farming in Estonia started through a sex-biased migration from the steppe», Current Biology, 27(14), p. 2185–2193.
Ségurel, L. et al., 2013, «Positive selection of protective variants for type 2 diabetes from the Neolithic onward: a case study in Central Asia», European Journal of Human Genetics, 21(10), p. 1146–1151.
Ségurel, L. et Bon, C., 2017, «On the evolution of lactase persistence in humans», Annual Review of Genomics and Human Genetics, 18(1), p. 297–319.
Shennan, S. et al., 2013, «Regional population collapse followed initial agriculture booms in mid-Holocene Europe», Nature Communications, 4.
Shriner, D. et Rotimi, C. N., 2018, «Whole-genomesequence-based haplotypes reveal single origin of the sickle allele during the Holocene wet phase», American Journal of Human Genetics, 102(4), p. 547–556.
Skoglund, P. et al., 2012, «Origins and genetic legacy of Neolithic farmers and hunter-gatherers in Europe», Science, 336(6080), p. 466–469.
Skoglund, P. et al., 2016, «Genomic insights into the peopling of the Southwest Pacific», Nature, 538(7626).
Unterländer, M. et al., 2017, «Ancestry and demography and descendants of Iron Age nomads of the Eurasian Steppe», Nature Communications, 8.
Valdiosera, C. et al., 2018, «Four millennia of Iberian biomolecular prehistory illustrate the impact of prehistoric migrations at the far end of Eurasia», Proceedings of the National Academy of Sciences, 115(13).
Verdu, P. et al., 2009, «Origins and genetic diversity of Pygmy hunter-gatherers from Western Central Africa», Current Biology, 19(4).
Verdu, P. et al., 2013, «Sociocultural behavior, sex-biased admixture, and effective population sizes in Central African Pygmies and non-Pygmies», Molecular Biology and Evolution, 30(4), p. 918–937.
Часть 4
Arias, L. et al., 2018, «Cultural innovations influence patterns of genetic diversity in Northwestern Amazonia», Molecular Biology and Evolution, 35(11), p. 2719–2735.
Baker, J. L. et al., 2017, «Human ancestry correlates with language and reveals that race is not an objective genomic classifier», Scientific Reports, 7(1).
Balaresque, P. et al., 2015, «Y-chromosome descent clusters and male differential reproductive success: young lineage expansions dominate Asian pastoral nomadic populations», European Journal of Human Genetics, 23(10), p. 1413.
Banda, Y. et al., 2015, «Characterizing race/ethnicity and genetic ancestry for 100,000 subjects in the genetic epidemiology research on adult health and aging (GERA) cohort», Genetics, 200(4), p. 1285–1295.
Behar, D. M. et al., 2010, «The genome-wide structure of the Jewish people», Nature, 466(7303), p. 238–242.
Blum, M. G. B. et al., 2006, «Matrilineal fertility inheritance detected in hunter-gatherer populations using the imbalance of gene genealogies», PLoS Genetics, 2(8).
Bouchard, G. et De Braekeleer, M., 1991, «Histoire d’un génome: population et génétique dans l’est du Québec», Annales de démographie historique, p. 350–353.
Brunet, G. et al., 2009, «Trente ans d’étude de la maladie de Rendu-Osler en France: démographie historique, génétique des populations et biologie moléculaire», Population, 64(2), p. 305.
Bryc, K. et al., 2015, «The genetic ancestry of African Americans, Latinos, and European Americans across the United States», American Journal of Human Genetics, 96(1), p. 37–53.
Campbell, M. C. et al., 2015, «The peopling of the African continent and the diaspora into the new world», Current Opinion in Genetics and Development, 29, p. 120–132.
Cavalli-Sforza, L., 1996, Gènes, peuples et langues, Paris, Odile Jacob.
Chaix, R. et al., 2004, «The genetic or mythical ancestry of descent groups: Lessons from the Y chromosome», American Journal of Human Genetics, 75(6).
Chaix, R. et al., 2007, «From social to genetic structures in central Asia», Current Biology, 17(1), p. 43–48.
Charbonneau, H. et al., 1987, «Naissance d’une population: les Français établis au Canada au XVIIe siècle», Annales de géographie, 547, p. 370–371.
Crawford, M. H., 1983, «The anthropological genetics of the Black Caribs “Garifuna” of Central America and the Caribbean», American Journal of Physical Anthropology, 26(1 S), p. 161–192.
Ebenesersdóttir, S. S. et al., 2018, «Ancient genomes from Iceland reveal the making of a human population», Science, 360(6392), p. 1028–1032.
Fortes-Lima, C. et al., 2018, «Exploring Cuba’s population structure and demographic history using genome-wide data», Scientific Reports, 8(1).
Fortes-Lima, C. et al., 2017, «Genome-wide ancestry and demographic history of African-descendant Maroon communities from French Guiana and Suriname», American Journal of Human Genetics, 101(5), p. 725–736.
Gudbjartsson, D. F. et al., 2015, «Large-scale whole-genome sequencing of the Icelandic population», Nature Genetics, 47(5), p. 435–444.
Guedes, L. et al., 2018, «First Paleogenetic evidence of probable syphilis and treponematoses cases in the Brazilian colonial period», BioMed Research International, 2018.
Haak, W. et al., 2015, «Massive migration from the steppe was a source for Indo-European languages in Europe», Nature, 522(7555), p. 207–211.
Han, E. et al., 2017, «Clustering of 770,000 genomes reveals post-colonial population structure of North America», Nature Communications, 8.
Heyer, E., 1993, «Population structure and immigration; a study of the Valserine Valley (French Jura) from the 17th century until the present», Annals of Human Biology, 20(6).
Heyer, E. et al., 2012, «Sex-specific demographic behaviours that shape human genomic variation», Molecular Ecology, 21(3).
Heyer, E. et al., 2005, «Cultural transmission of fitness: Genes take the fast lane», Trends in Genetics, 21(4).
Heyer, E. et al., 2015, «Patrilineal populations show more male transmission of reproductive success than cognatic populations in Central Asia, which reduces their genetic diversity», American Journal of Physical Anthropology, 157(4), p. 537–543.
Heyer, E. et Brunet, G., 2007, «Généalogie et structure génétique de la population», in A. Bideau et G. Brunet (dir.), Essai de démographie historique et de génétique des populations — Une population du Jura méridional du XVIIe siècle à nos jours, Paris, INED, Études et enquêtes historiques, p. 159–172.
Heyer, E. et al., 2017, «Anthropological genetics in Central Asia on the peopling of the region and the interplay between cultural traits and genetic diversity», in S. Roche (dir.), The Family in Central Asia, Heidelberg, Éditions Klaus Schwarz, p. 222–242.
Heyer, E. et Mennecier, P., 2009, «Genetic and linguistic diversity in Central Asia», in Becoming Eloquent: Advances in the Emergence of Language, Human Cognition, and Modern Cultures, John Benjamins Publishing, p. 163–180.
Heyer, E. et Tremblay, M., 1995, «Variability of the genetic contribution of Quebec population founders associated to some deleterious genes», American Journal of Human Genetics, 56(4), p. 970–978.
Heyer, E. et al., 1997, «Seventeenth-century European origins of hereditary diseases in the Saguenay population (Quebec, Canada)», Human Biology, 69(2), p. 209–225.
Homburger, J. R. et al., 2015, «Genomic insights into the ancestry and demographic history of South America», PLoS Genetics, 11(12).
Jeong, C. et al., 2019, «The genetic history of admixture across inner Eurasia», Nature Ecology & Evolution, 3(6).
Karmin, M. et al., 2015, «A recent bottleneck of Y chromosome diversity coincides with a global change in culture», Genome Research, 25(4), p. 459–466.
Kopelman, N. et al., 2020, «High-resolution inference of genetic relationships among Jewish populations», European Journal of Human Genetics.
Landry, Y., 1992, Les Filles du roi au XVIIe siècle: orphelines en France, pionnières au Canada; suivi d’un Répertoire biographique des Filles du roi, Montréal, Éditions Leméac.
Landry, Y., 2001, «L’émigration française au Canada avant 1760: premiers résultats d’une microanalyse», in A. Courtemanche et M. Pâquet (dir.), Prendre la route: l’expérience migratoire en Europe et en Amérique du Nord du XIVe au XXe siècle, Hull, Éditions Vents d’ouest, 2001.
Lesca, G. et al., 2008, «Hereditary hemorrhagic telangiectasia: Evidence for regional founder effects of ACVRL1 mutations in French and Italian patients», European Journal of Human Genetics, 16(6), p. 742–749.
Leslie, S. et al., 2015, «The fine-scale genetic structure of the British population», Nature, 519(7543), p. 309–314.
Manni, F. et al., 2008, «Do surname differences mirror dialect variation?», Human Biology, 80(1), p. 41–64.
Marcheco-Teruel, B. et al., 2014, «Cuba: exploring the history of admixture and the genetic basis of pigmentation using autosomal and uniparental markers», PLoS Genetics, 10(7).
Marchi, N. et al., 2017, «Sex-specific genetic diversity is shaped by cultural factors in Inner Asian human populations», American Journal of Physical Anthropology, 162(4), p. 627–640.
Mathias, R. A. et al., 2016, «A continuum of admixture in the Western Hemisphere revealed by the African Diaspora genome», Nature Communications, 7.
Montinaro, F. et al., 2015, «Unravelling the hidden ancestry of American admixed populations», Nature Communications, 6(6596).
Moreau, C. et al., 2011, «Deep human genealogies reveal a selective advantage to be on an expanding wave front», Science, 334(6059), p. 1148–1150.
Moreno-Estrada, A. et al., 2013, «Reconstructing the population genetic history of the Caribbean», PLoS Genetics, 9(11).
Patin, E. et al., 2017, «Dispersals and genetic adaptation of Bantu-speaking populations in Africa and North America», Science, 356(6337), p. 543–546.
Raghavan, M. et al., 2015, «Genomic evidence for the Pleistocene and recent population history of Native Americans», Science, 349(6250).
Reich, D. et al., 2012, «Reconstructing Native American population history», Nature, 488(7411), p. 370–374.
Rosser, H. et al., 2000, «Y-chromosomal diversity in Europe is clinal and influenced primarily by geography, rather than by language», American Journal of Human Genetics, 67(6), p. 1526–1543.
Rotimi, C. N. et al., 2017, «The African diaspora: history, adaptation and health», Current Opinion in Genetics and Development, 41, p. 77–84.
Salzano, F. M. et Sans, M., 2014, «Interethnic admixture and the evolution of Latin American populations», Genetics and Molecular Biology, 37(1 SUPPL.), p. 151–170.
Schroeder, H. et al., 2015, «Genome-wide ancestry of 17th-century enslaved Africans from the Caribbean», Proceedings of the National Academy of Sciences, 112(12), p. 3669–3673.
Star, B. et al., 2017, «Ancient DNA reveals the Arctic origin of Viking Age cod from Haithabu, Germany», Proceedings of the National Academy of Sciences, 114(34) p. 9152–9157.
Verdu, P. et al., 2014, «Patterns of admixture and population structure in native populations of Northwest North America», PLoS Genetics, 10(8).
Via, M. et al., 2011, «History shaped the geographic distribution of genomic admixture on the island of Puerto Rico», PLoS ONE, 6(1).
Yunusbayev, B. et al., 2015, «The genetic legacy of the expansion of Turkic-speaking nomads across Eurasia», PLoS Genetics, 11(4).
Zeng, T. C. et al., 2018, «Cultural hitchhiking and competition between patrilineal kin groups explain the post-Neolithic Y-chromosome bottleneck», Nature Communications, 9(1).
Zerjal, T. et al., 2003, «The genetic legacy of the Mongols», American Journal of Human Genetics, 72(3), p. 717–721.
Zhabagin, M. et al., 2017, «The connection of the genetic, cultural and geographic landscapes of Transoxiana», Scientific Reports, 7(1).
Часть 5
Altshuler, D. L. et al., 2010, «A map of human genome variation from population-scale sequencing», Nature, 467(7319), p. 1061–1073.
Auton, A. et al., 2015, «A global reference for human genetic variation», Nature, 526(7571), p. 68–74.
Benonisdottir, S. et al., 2016, «Epigenetic and genetic components of height regulation», Nature Communications, 7.
Blanpain, N. et Chardon, O., 2010, «Projections de population à l’horizon 2060: Un tiers de la population âgé de plus de 60 ans», Insee Première, 1320.
Bourgain, C. et al., 2019, «Faut-il se fier aux tests génétiques?», Pour la Science, 499.
Collectif, 2016, «A century of trends in adult human height», ELife, 5, p. 1–29.
Derrida, B. et al., 2000, «On the genealogy of a population of biparental individuals», Journal of Theoretical Biology, 203(3), p. 303–315.
Donnelly, K. P., 1983, «The probability that related individuals share some section of genome identical by descent», Theoretical Population Biology, 23(1), p. 34–63.
Erlich, Y. et al., 2018, «Identity inference of genomic data using long-range familial searches», Science, 362(6415), p. 690–694.
Formicola, V. et Giannecchini, M., 1999, «Evolutionary trends of stature in upper Paleolithic and Mesolithic Europe», Journal of Human Evolution, 36(3), p. 319–333.
Gauvin, H. et al., 2014, «Genome-wide patterns of identityby-descent sharing in the French Canadian founder population», European Journal of Human Genetics, 22(6), p. 814–821.
Grasgruber, P. et al., 2014, «The role of nutrition and genetics as key determinants of the positive height trend», Economics and Human Biology, 15, p. 81–100.
Grasgruber, P. et al., 2016, «Major correlates of male height: A study of 105 countries», Economics and Human Biology, 21, p. 172–195.
Gravel, S. et Steel, M., 2015, «The existence and abundance of ghost ancestors in biparental populations», Theoretical Population Biology, 101, p. 47–53.
Gymrek, M. et al., 2013, «Identifying personal genomes by surname inference», Science, 339 (6117), p. 321–325.
Helgason, A. et al., 2003, «A populationwide coalescent analysis of Icelandic matrilineal and patrilineal genealogies: Evidence for a faster evolutionary rate of mtDNA lineages than Y chromosomes», American Journal of Human Genetics, 72(6), p. 1370–1388.
Helgason, A. et al., 2008, «An association between the kinship and fertility of human couples», Science, 319(5864), p. 813–816.
Hermanussen, M., 2003, «Stature of early Europeans», Hormones, 2(3), p. 175–178.
Heyer, E. (éd.), 2015, Une belle histoire de l’Homme, Flammarion.
Heyer, E., 1995, «Genetic consequences of differential demographic behaviour in the Saguenay region, Québec», American Journal of Physical Anthropology, 98(1).
Heyer, E. et Reynaud-Paligot, C., 2017, Nous et les autres — Des préjugés au racisme, Paris, La Découverte.
Heyer, E. et Reynaud-Paligot, C., 2019, On vient vraiment tous d’Afrique?, Paris, Flammarion.
Kaplanis, J. et al., 2018, «Quantitative analysis of population-scale family trees with millions of relatives», Science, 360(6385), p. 171–175.
Kelleher, J. et al., 2016, «Spread of pedigree versus genetic ancestry in spatially distributed populations», Theoretical Population Biology, 108, p. 1–12.
Krausz, C., 2001, «Identification of a Y chromosome haplogroup associated with reduced sperm counts», Human Molecular Genetics, 10(18), p. 1873–1877.
Leslie, S. et al., 2015, «The fine-scale genetic structure of the British population», Nature, 519(7543), p. 309–314.
Li, J. Z. et al., 2008, «Worldwide human relationships inferred from genome-wide patterns of variation», Science, 319(5866), p. 1100–1104.
Marchi, N. et al., 2018, «Close inbreeding and low genetic diversity in Inner Asian human populations despite geographical exogamy», Scientific Reports, 8(1).
Marouli, E. et al., 2017, «Rare and low-frequency coding variants alter human adult height», Nature, 542(7640), p. 186–190.
McQuillan, R. et al., 2012, «Evidence of inbreeding depression on human height», PLoS Genetics, 8(7).
Nettle, D., 2002, «Women’s height, reproductive success and the evolution of sexual dimorphism in modern humans», Proceedings of the Royal Society B: Biological Sciences, 269(1503), p. 1919–1923.
Ralph, P. et Coop, G., 2013, «The geography of recent genetic ancestry across Europe», PLoS Biology, 11(5).
Robine, J.-M. et Cambois, E., 2013, «Health life expectancy in Europe», Population and Societies, 499.
Rohde, D. L. T. et al., 2004, «Modelling the recent common ancestry of all living humans», Nature, 431(7008), p. 562–566.
Vallin, J. et Meslé, F., 2010, «Espérance de vie: peut-on gagner trois mois par an indéfiniment?», Bulletin mensuel d’information de l’Institut national d’études démographiques, 473, p. 1–4. www.ined.fr/fichier/s_rubrique/260/publi_pdf1_pes473.fr.pdf.
Yengo, L. et al., 2018, «Meta-analysis of genome-wide association studies for height and body mass index in ~700 000 individuals of European ancestry», Human Molecular Genetics, 27(20), p. 3641–3649.
Заключение
Bokelmann, L. et al., 2019, «A genetic analysis of the Gibraltar Neanderthals», Proceedings of the National Academy of Sciences, 116(31), p. 15610–15615.
Chen, F. et al., 2019, «A late Middle Pleistocene Denisovan mandible from the Tibetan Plateau», Nature, 569(7756), p. 409–412.
DeCasien, A. R. et al., 2017, «Primate brain size is predicted by diet but not sociality», Nature Ecology and Evolution, 1(5).
Détroit, F. et al., 2019, «A new species of Homo from the Late Pleistocene of the Philippines», Nature, 568(7751), p. 181–186.
Dunbar, R., 1998, «The social brain hypothesis», Evolutionary Anthropology, p. 178–190.
Green, R. E. et al., 2010, «A draft sequence of the Neandertal genome», Science, 328(5979), p. 710–722.
Hershkovitz, I. et al., 2018, «The earliest modern humans outside Africa», Science, 359(6374), p. 456–459.
Heyer, E. (éd.), 2015, Une belle histoire de l’Homme, Flammarion.
Hublin, J.-J. et al., 2015, «Brain ontogeny and life history in Pleistocene hominins», Philosophical Transactions of the Royal Society B: Biological Sciences, 370(1663).
Hublin, J. J., 2009, «Out of Africa: modern human origins special feature: the origin of Neandertals», Proceedings of the National Academy of Sciences, 106(38), p. 16022–16027.
Hublin, J.-J., 2017, «The last Neanderthal», Proceedings of the National Academy of Sciences, 114(40), p. 10520–10522.
Hublin, J.-J. et al., 2017, «New fossils from Jebel Irhoud, Morocco and the pan-African origin of Homo sapiens», Nature, 546(7657), p. 289–292.
Jónsson, H. et al., 2017, «Parental influence on human germline de novo mutations in 1,548 trios from Iceland», Nature, 549(7673), p. 519–522.
Kaplan, H. et al., 2000, «A theory of human life history evolution: Diet, intelligence, and longevity», Evolutionary Anthropology, 9(4), p. 156–185.
Llamas, B. et al., 2017, «Human evolution: A tale from ancient genomes», Philosophical Transactions of the Royal Society B: Biological Sciences, 372(1713).
Meyer, M. et al., 2016, «Nuclear DNA sequences from the Middle Pleistocene Sima de los Huesos hominins», Nature, 531(7595), p. 504–507.
Mikkelsen, T. S. et al., 2005, «Initial sequence of the chimpanzee genome and comparison with the human genome», Nature, 437(7055), p. 69–87.
Pavard, S. et Coste, C., 2019, «Evolution of the human lifecycle», in Encyclopedia of Biomedical Gerontology, Academic Press.
Prado-Martinez, J. et al., 2013, «Great ape genetic diversity and population history», Nature, 499(7459), p. 471–475.
Prat, S., 2018, «First hominin settlements out of Africa. Tempo and dispersal mode: Review and perspectives», Comptes Rendus — Palevol, 17(1–2), p. 6–16.
Prüfer, K. et al., 2012, «The bonobo genome compared with the chimpanzee and human genomes», Nature, 486, p. 527–531.
Reich, D. et al., 2010, «Genetic history of an archaic hominin group from Denisova Cave in Siberia», Nature, 468(7327), p. 1053–1060.
Sánchez-Quinto, F. et Lalueza-Fox, C., 2015, «Almost 20 years of Neanderthal palaeogenetics: Adaptation, admixture, diversity, demography and extinction», Philosophical Transactions of the Royal Society B: Biological Sciences, 370(1660).
Scally, A. et Durbin, R., 2012, «Revising the human mutation rate: implications for understanding human evolution», Nature Reviews Genetics, 13(10), p. 745–753.
Scerri, E. M. L. et al., 2018, «Did our species evolve in subdivided populations across Africa, and why does it matter?», Trends in Ecology & Evolution, 33(8), p. 582–594.
Schlebusch, C. M. et al., 2017, «Southern African ancient genomes estimate modern human divergence to 350,000 to 260,000 years ago», Science, 358(6363), p. 652–655.
Ségurel, L. et al., 2014, «Determinants of mutation rate variation in the human germline», Annual Review of Genomics and Human Genetics, 15(1), p. 47–70.
Slatkin, M. et Racimo, F., 2016, «Ancient DNA and human history», Proceedings of the National Academy of Sciences, 113(23), p. 6380–6387.
Slon, V. et al., 2018, «The genome of the offspring of a Neanderthal mother and a Denisovan father», Nature, 561(7721), p. 113–116.
Verendeev, A. et Sherwood, C. C., 2017, «Human brain evolution», Current Opinion in Behavioral Sciences, 16, p. 41–45.
Wolf, A. B. et Akey, J. M., 2018, «Outstanding questions in the study of archaic hominin admixture», PLoS Genetics, 14(5), p. 1–14.
